BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E06LP1|AL426225
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1076 1569 0.0
>3x_Contig1076
Length = 4245
Score = 1569 bits (790), Expect = 0.0
Identities = 802/806 (99%), Gaps = 1/806 (0%)
Strand = Plus / Minus
Query: 1 gatctctcaaatcttgtaccaaagattttccacaaatccattagtcaagttgttaggtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 gatctctcaaatcttgtaccaaagattttccacaaatccattagtcaagttgttaggtgt 1389
Query: 61 atggggcacaagagctggcgctccagctgggcaacaagtggctttgtcgggtttgtcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 atggggcacaagagctggcgctccagctgggcaacaagtggctttgtcgggtttgtcata 1329
Query: 121 ctacattcaaccaccattctccgtcactgatgccttattggacccaatcaagacagttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 ctacattcaaccaccattctccgtcactgatgccttattggacccaatcaagacagttgt 1269
Query: 181 ctacgttggcttcgtgttaggagcatgtgcattgttctctaagacctggattgagatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 ctacgttggcttcgtgttaggagcatgtgcattgttctctaagacctggattgagatctc 1209
Query: 241 aggaacttctcctcgcgatgttgctaaacaattcaaggaccaaggattgaccatcaacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 aggaacttctcctcgcgatgttgctaaacaattcaaggaccaaggattgaccatcaacgg 1149
Query: 301 caaaagagaaactaacgtctacaaggaattgaagaaaattattccaactgccgccgcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 caaaagagaaactaacgtctacaaggaattgaagaaaattattccaactgccgccgcttt 1089
Query: 361 cggtggtgctgtcattggtgccctatcggtgggatcggatctcctaggaacattaggttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 cggtggtgctgtcattggtgccctatcggtgggatcggatctcctaggaacattaggttc 1029
Query: 421 aggtacttccattttgatggcaaccacaacaatttatggttactacgaagt-rctgctaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1028 aggtacttccattttgatggcaaccacaacaatttatggttactacgaagtagctgctaa 969
Query: 480 agaaggtggtttcacgaagaacttggtatcaggtttctcagaaatgatgttaatgcatcc 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 968 agaaggtggtttcacgaagaacttggtatcaggtttctcagaaatgatgtaaatgcatcc 909
Query: 540 tccttagcgtcatttcacagagtacattcatttaaagtcaatttgtattctataatcaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tccttagcgtcatttcacagagtacattcatttaaagtcaatttgtattctataatcaat 849
Query: 600 cagtccatagataagtaaatagaaatcagaacacttcaagaaagaaagaaaaacaaaaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 cagtccatagataagtaaatagaaatcagaacacttcaagaaagaaagaaaaacaaaaga 789
Query: 660 ttagcgataagcggcttttagcagtyacagagttgattatccatcgccaggtgcctattt 719
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 788 ttagcgataagcggcttttagcagtcacagagttgattatccatcgccaggtgcctattt 729
Query: 720 cctactaggaattttatttaacagaatgtactaaacctaacattcccggccagtgaatat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cctactaggaattttatttaacagaatgtactaaacctaacattcccggccagtgaatat 669
Query: 780 tatgatggttattgcaaatacgaaaa 805
||||||||||||||||||||||||||
Sbjct: 668 tatgatggttattgcaaatacgaaaa 643
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5943
Number of Sequences: 1807
Number of extensions: 5943
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)